If you wish to pursue this, perhaps it would be best to create a new thread asking for assistance in making a fat32 drive capable of executing linux executables. If you want to use it on Windows-based machines as well, then you'll need to do some further tweaking and experimenting to get it to work. IMO, if you are only going to use this USB key on linux, then format it ext4 and don't look back. Personally, I don't use fat32 or ntfs anymore, and haven't in a long time, so I'm not sure I can offer more assistance on this manner. It is possible to do, but it requires further tweaking (as noted in the links above). PEmicro�s GDB Eclipse Plug-in for the GD32F103V8T6 is available at no charge Commercial Tool Support - PEmicro hardware and debug for this device is supported in many leading toolchains. The further complication here is that you want to run it on a fat32-formatted drive that, by default, does not support linux file permissions. The GDB support includes flash programming, provisioning, trim, hardware breakpoints, software breakpoints, and more. Your initial question was in regards to running eclipse without installing it. There is a way to work around this and it is to set all files on the drive as executable. For example, select the Eclipse IDE for C/C++ Developers then click INSTALL. Eclipse packages window appears, lets choose your favorite package IDE. In a nutshell, fat32 does not support linux file permissions, which is why you can't set the file executable. In order to install Eclipse, launch the installer file eclipse-inst by running the following command: cd /opt/eclipse-installer.
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